You can wrap an executable file around a PowerShell script (PS1) so that you can distribute the script as an .exe file rather than distributing a “raw” script file. This eliminates the need to explain ...
# -- Step 4: GATK hard filter on INFO field for reliable SNPs (NOT related to N sample size) AND general loose ExcessHet filter # -- Step 5: Check per sample DP and GQ before sample-level filters # -- ...
Otherwise, argparse library won't work. Compatibility for older versions in the making. --tutorial and --exercise are boolean arguments. Type the argument without any value (as in example above) for ...
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